PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010113245.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 269aa    MW: 28194.2 Da    PI: 5.3662
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010113245.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.4e-05158178323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C+ C + F ++  L  H+r+H
  XP_010113245.1 158 CSVCRRDFYSWKALFGHMRSH 178
                     ********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280158178IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MTNNKDESDK KFEAEKKPTT QQDEGDVGNP NAVVAMSAPL LARANPRQEV GEQQCRVQPF  60
SSDQDQVGGS QNPMPPPPPH FRAIQAPGGD GAKGSIGVSP AVTFMDGGSS GGGGVLVGGG  120
AAAAPSVRPI SDNRSSTSGI PLKRKSDVVA PPGVRPICSV CRRDFYSWKA LFGHMRSHPE  180
RQWRGCFPPP VEQPQQEQAL SAPLPAAYAE AGGAQGGTTR GLNIDLNEPH GPTVDDGAAH  240
TPPLENKKDG RPADFDINKI PPSDDEDIA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010113245.10.0hypothetical protein L484_026573
TrEMBLW9SMQ70.0W9SMQ7_9R
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102022128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.12e-12C2H2-like zinc finger protein